Dynamics of Hydration Water around Native and Misfolded alpha-Lactalbumin
J. Phys. Chem. B , Volume 120 - Issue 21 p. 4756- 4766
As water is an essential ingredient in protein structure, dynamics, and functioning, knowledge of its behavior near proteins is crucial. We investigate water dynamics around bovine alpha-lactalbumin by combining molecular dynamics simulations with polarization-resolved femtosecond infrared (fs-IR) spectroscopy. We identify slowly reorienting surface waters and establish their hydrogen-bond lifetime and reorientation dynamics, which we compare to the experimentally measured anisotropy decay. The calculated number of slow surface waters is in reasonable agreement with the results of fs-IR experiments. While surface waters form fewer hydrogen bonds than the bulk, within the hydration layer water is slower when donating more hydrogen bonds. At concave sites the protein water hydrogen bonds break preferably via translational diffusion rather than via a hydrogen-bond jump mechanism. Water molecules reorient slower near these sites than at convex water-exposed sites. Protein misfolding leads to an increased exposure of hydrophobic groups, inducing relatively faster surface water:dynamics. Nevertheless, the larger exposed surface slows down a larger amount of water. While for native proteins hydrating water is slower near hydrophobic than near hydrophilic residues, mainly due to stronger confinement, misfolding causes hydrophobic water to reorient relatively faster because exposure of hydrophobic groups destroys concave protein cavities with a large excluded volume.
|J. Phys. Chem. B|
Brotzakis, Z.F, Groot, C.C.M, Brandenburgo, W.H, Bakker, H.J, & Bolhuis, P.G. (2016). Dynamics of Hydration Water around Native and Misfolded alpha-Lactalbumin. J. Phys. Chem. B, 120(21), 4756–4766. doi:10.1021/acs.jpcb.6b02592