AMOLF Institutional Repository: AMOLF Institutional Repository

Local density of states, spectrum, and far-field interference of surface plasmon polaritons probed by cathodoluminescence Article

Phys. Rev. B, 79(Article number: 113405), 1-4.

Martin Kuttge, Ernst Jan R. Vesseur, A.F. Koenderink (Femius), H.J. Lezec, H.A. Atwater (Harry), F.J. García de Abajo (Javier) and A. Polman (Albert)

March 2009
TeraHertz dielectric relaxation of biological water confined in model membranes made of lyotropic phopholipids Article

Mol. Cryst. Liq. Cryst., 108-117.

D. Paparo, K.J. Tielrooij, H.J. Bakker (Huib) and M. Bonn (Mischa)

March 2009
Efficient generation of propagating plasmons by electron beams Article

Nano Lett., 1176-1181.

W. Cai, R. Sainidou, J. Xu, A. Polman (Albert) and F.J. García de Abajo (Javier)

March 2009
Determining absolute molecular orientation at interfaces : a phase retrieval approach for sum frequency generation spectroscopy Article

J. Phys. Chem. C, 6100-6106.

M. Sovago, E.M. Vartiainen and M. Bonn (Mischa)

March 2009
Broad-band omnidirectional antireflection coatings based on semiconductor nanorods Article

Adv. Mater., 973-978.

S.L. Diedenhofen, G. Vecchi, R. Algra, A. Hartsuiker, O.L. Muskens, G.W.G. Immink, E.P.A.M. Bakkers (Erik), W.L. Vos and J. Gómez Rivas (Jaime)

March 2009
Geometrical frustration : a study of 4d hard spheres Article

Phys. Rev. E, 79(Article number: 30201), 1-4.

J.A. van Meel, D. Frenkel and P. Charbonneau

March 2009
Reorientation of HDO in liquid H2O at different temperatures: Comparison of first and second order correlation functions Article

Chem. Phys. Lett., 71-74.

K.J. Tielrooij, C. Petersen, Y.L.A. Rezus (Yves) and H.J. Bakker (Huib)

March 2009
Nitromatrix provides improved LC-MALDI signals and more protein identifications Article

Proteomics, 1662-1671.

P. Kouvonen, L.A. McDonnell, R.M.A. Heeren (Ron) and G.L. Corthals

March 2009
Force- and kinesin-8-dependent effects in the spatial regulation of fission yeast microtubule dynamics Article

Mol. Syst. Biol., 5(Article number: 250), 1-10.

C. Tischer, D. Brunner and A.M. Dogterom (Marileen)

March 2009
Electrical excitation of surface plasmon polaritons Dissertation

Photonic Materials

R.V.A. van Loon

February 2009
Hydrogen bonding strength of interfacial water determined with surface sum-frequency generation Article

Chem. Phys. Lett., 7-12.

M. Sovago, R.K. Campen, H.J. Bakker (Huib) and M. Bonn (Mischa)

February 2009
On-chip green silica upconversion microlaser Article

Opt. Lett., 482-484.

T. Lu, L. Yang (Le), R.V.A. van Loon, A. Polman (Albert) and K.J. Vahala

February 2009
Large photonic strength of highly tunable resonant nanowire materials Article

Nano Lett., 930-934.

O.L. Muskens, S.L. Diedenhofen, B.C. Kaas, R. Algra, E.P.A.M. Bakkers (Erik), J. Gómez Rivas (Jaime) and A. Lagendijk

February 2009
Force spectroscopy of a single artificial biomolecule bond : The Kramers' high-barrier limit holds close to the critical force Article

J. Chem. Phys., 130(Article number: 51103), 1-4.

J. Husson, A.M. Dogterom (Marileen) and F. Pincet

February 2009
Strong luminescence quantum-efficiency enhancement near prolate metal nanoparticles: Dipolar versus higher-order modes Article

J. Appl. Phys., 105(Article number: 44302), 1-8.

H. Mertens and A. Polman (Albert)

February 2009
Phase variation of type 1 fimbriae : a single cell investigation Dissertation

Biophysics

A.M. Adiciptaningrum

January 2009
Light trapping for solar cells using localised surface plasmons in self-assembled AG nanoparticles In Proceedings

F.J. Beck, S. Mokkapati, A. Polman (Albert) and K.R. Catchpole

January 2009
Optical and magnetic properties of hexagonal arrays of subwavelength holes in optically thin cobalt films Article

Nano Lett., 9(1), 1-6.

G. Ctistis (Georgios), E. Papaioannou, P. Patoka, J. Gutek, P. Fumagalli and M. Giersig

January 2009
Tracking light pulses with near-field microscopy Book Chapter

R.J.P. Engelen and L.K. Kuipers (Kobus)

January 2009
Residue analysis : summary Book Chapter

J.J. Boon, T.F.M. Oudemans (Tania), J. van der Horst (Jerre) and A.E. Kerkhoff

January 2009
Analysis of archaeological residues on pottery Book Chapter

J.J. Boon, T.F.M. Oudemans (Tania), J. van der Horst (Jerre) and A.E. Kerkhoff

January 2009
Water as a molecular hinge in amide-like structures In Proceedings

R.L.A. Timmer (Rutger) and H.J. Bakker (Huib)

January 2009
Immobilized water molecules in hydrophobic solvation In Proceedings

Y.L.A. Rezus (Yves) and H.J. Bakker (Huib)

January 2009
Ultrafast dynamics of water in ionic micelles In Proceedings

A.M. Dokter, S. Woutersen (Sander) and H.J. Bakker (Huib)

January 2009
Seagram mural paintings from the viewpoint of preservation and restoration Book Chapter

L. Carlyle, J.J. Boon, M. Bustin and P. Smithen

January 2009
Proton conduction in aqueous acid-base reactions In Proceedings

M.J. Cox, B.J. Siwick and H.J. Bakker (Huib)

January 2009
Tissue analysis with high resolution imaging mass spectrometry Book Chapter

A.F.M. Altelaar and R.M.A. Heeren (Ron)

January 2009
Modeling tip growth : pushing ahead Book Chapter

M.N. de Keijzer, A.M.C. Emons (Anne Mie) and B.M. Mulder (Bela)

January 2009
Electron capture dissociation of peptide hormone changes upon opening of the tocin ring and complexation with transition metal cations Article

Rapid Commun. Mass Spectrom., 31-38.

Y.E.M. van der Burgt, M. Palmblad, H.C. Dalebout, R.M.A. Heeren (Ron) and A.M. Deelder

January 2009
Size-dependent oscillator strength and quantum efficiency of CdSe quantum dots controlled via the local density of states Article

Phys. Rev. B, 79(Article number: 45301), 1-9.

M.D. Leistikow, J. Johansen, S. Kettelarij, P. Lodahl and W.L. Vos

January 2009
Influence of ions on aqueous acid-base reactions Article

ChemPhysChem, 236-244.

M.J. Cox, B.J. Siwick and H.J. Bakker (Huib)

January 2009
Effect of confinement on proton-transfer reactions in water nanopools Article

ChemPhysChem, 245-251.

K.J. Tielrooij, M.J. Cox and H.J. Bakker (Huib)

January 2009
Subwavelength structure of the evanescent field of an optical Bloch wave Article

Phys. Rev. Lett., 102(Article number: 23902), 1-4.

R.J.P. Engelen, D. Mori, T. Baba and L.K. Kuipers (Kobus)

January 2009
Coherent anti-Stokes Raman scattering microscopy for quantitative characterization of mixing and flow in microfluidics Article

Opt. Lett., 211-213.

D. Schafer (Dawn), M. Müller (Michiel), M. Bonn (Mischa), D.W.M. Marr, J. van Maarseveen (Jan) and J.A. Squier (Jeff)

January 2009
Method to deterministically study photonic nanostructures in different experimental instruments Article

J. Microsc., 18-23.

B.H. Husken, L.A. Woldering, C. Blum and W.L. Vos

January 2009
Observation of polarization singularities at the nanoscale Article

Phys. Rev. Lett., 102(Article number: 33902), 1-4.

M. Burresi, R.J.P. Engelen, A. Opheij, D. van Oosten, D. Mori, T. Baba and L.K. Kuipers (Kobus)

January 2009
Structure and dynamics of interfacial water in model lung surfactants Article

Faraday Discuss., 145-159.

A. Ghosh, R.K. Campen, M. Sovago and M. Bonn (Mischa)

January 2009
Experimental observation of second-harmonic generation and diffusion inside random media Article

J. Opt. Soc. Am. B, 235-243.

S. Faez (Sanli), P.M. Johnson, D.A. Mazurenko and A. Lagendijk

January 2009
Method for broadband spectroscopy of light transport through opaque scattering media Article

Opt. Lett., 395-397.

O.L. Muskens and A. Lagendijk

January 2009
Photoswitchable sexithiophene-based molecular wires Article

Org. Lett., 721-724.

J. Areephong, J.H. Hurenkamp, M.T.W. Milder, A. Meetsma, J. Herek, W.R. Browne and B.L. Feringa

January 2009
Perspectives for imaging mass spectrometry in the proteomics landscape Article

Proteomics, 819-834.

L. MacAleese (Luke), J. Stauber and R.M.A. Heeren (Ron)

January 2009
Frequency dependence of the molecular reorientation of liquid water Book Chapter

H.J. Bakker (Huib) and R.L.A. Timmer (Rutger)

January 2009
Computational methods to study strongly-binding polymer-colloid systems Dissertation

B. Bozorgui

December 2008
Force generation in dividing E. coli cells : a handles-on approach using optical tweezers Dissertation

G.S. Verhoeven

December 2008
Plasmonic solar cells Article

Opt. Express, 16(26), 21793-21800.

K.R. Catchpole and A. Polman (Albert)

December 2008
Concise representation of mass spectrometry images by probabilistic latent semantic analysis Article

Anal. Chem., 80(24), 9649-9658.

M. Hanselmann, M. Kirchner, B.Y. Renard, E.R. Amstalden van Hove, K. Glunde, R.M.A. Heeren (Ron) and F.A. Hamprecht

November 2008
Atoms and clusters in strong laser fields Dissertation

Tatiana Marchenko

October 2008
Transcription regulation and genome organization Dissertation

Biochemical Networks

R. Hermsen (Rutger)

October 2008
Multiple scattering of waves in anisotropic random media Dissertation

B.C. Kaas

September 2008
A computational study of E. coli chemotaxis Dissertation

Biochemical Networks

S.B. van Albada

September 2008
Fabrication of photonic crystals and nanocavities Dissertation

L.A. Woldering

September 2008
Near-field visualization of strongly confined surface plasmon polaritons in metal-insulator-metal waveguides Article

Nano Lett., 2925-2929.

E. Verhagen (Ewold), J.A. Dionne (Jennifer), L.K. Kuipers (Kobus), H.A. Atwater (Harry) and A. Polman (Albert)

September 2008
Low-frequency atomic stabilization and dichotomy in superintense laser fields : Full Floquet results Article

Phys. Rev. A, 78(Article number: 33405), 1-11.

M. Stroe, I. Simbotin and M. Gavrila (Mihai)

September 2008
Low-frequency atomic stabilization and dichotomy in superintense laser fields from the high-intensity high-frequency Floquet theory Article

Phys. Rev. A, 78(3, Article number: 33404), 1-12.

M. Gavrila (Mihai), I. Simbotin and M. Stroe

September 2008
Niching in derandomized evolution strategies and its applications in quantum control: a journey from organic diversity to conceptual quantum desings Dissertation

O.M. Shir

June 2008
Dynamics and regulation at the tip: a high resolution view on microtubule assembly Dissertation

E.L. Munteanu

June 2008
Ultrafast investigations of slow light in photonic crystal structures Dissertation

R.J.P. Engelen

June 2008
Photonic crystals modified by optically resonant systems Dissertation

P.J. Harding

June 2008
Fitness landscapes of gene regulation in variable environments Dissertation

Biophysics

F.J. Poelwijk (Frank)

May 2008
Coherent control of biomolecules Dissertation

J. Savolainen (Janne)

May 2008
Fourier transform ion cyclotron resonance imaging mass spectrometry : development of instrumentation, data acquisition software and data processing methods Dissertation

I.M. Taban Barbu

April 2008
Electon-impact excitation and ionization cross sections for ground state and excited helium atoms Article

Atom. Data Nuc. Data Tab., 603-622.

Yu. Ralchenko, R.K. Janev, T. Kato, D.V. Fursa, I. Bray and F.J. de Heer

April 2008
Analysis of chaperone complexes by fourier transform ion cyclotron resonance mass spectrometry Dissertation

R.B.J. Geels

March 2008
Water in confinement : ultrafast dynamics of water in reverse micelles Dissertation

Ultrafast Spectroscopy

A.M. Dokter

March 2008
Color changes and chemical reactivity in seventeenth-century oil paintings (De Mayerne [MolArt]; 14) Dissertation

A. van Loon

January 2008
Snapshots of water : orientational dynamics of hydrogen-bonded systems Dissertation

Ultrafast Spectroscopy

Y.L.A. Rezus (Yves)

January 2008
Fluorescence lifetime of emitters with broad homogeneous linewidths modified in opal photonic crystals Article

J. Phys. Chem. C, 7250-7254.

I.S. Nikolaev, P. Lodahl and W.L. Vos

January 2008
Noncollinear optical parametric amplification in potassium titanyl phosphate pumped at 800 nm Article

Appl. Opt., 2870-2873.

H.-K. Nienhuys and H.J. Bakker (Huib)

January 2008
Attosecond angular streaking Article

Nature Phys., 565-570.

P. Eckle, M. Smolarski, P. Schlup, J. Biegert, A. Staudte, M. Schöffler, H.G. Muller, Reinhard Dörner and U. Keller

January 2008
Random organization : ordered chaos Article

Nature Phys., 345-346.

D. Frenkel

January 2008
Automated, feature-based image alignment for high-resolution imaging mass spectrometry of large biological samples Article

J. Am. Soc. Mass Spectrom., 823-832.

A. Broersen, R. van Liere, A.F.M. Altelaar, R.M.A. Heeren (Ron) and L.A. McDonnell

January 2008
Controlling the efficiency of an artificial light-harvesting complex Article

PNAS, 7641-7646.

J. Savolainen (Janne), R. Fanciulli, N. Dijkhuizen, A.L. Moore, J. Hauer, T. Buckup, M. Motzkus and J. Herek

January 2008
Chemical modification of colloidal masks for nanolithography Article

Langmuir, 24(11), 5967-5969.

D.L.J. Vossen, J.J. Penninkhof and A. van Blaaderen

January 2008
High trapping forces for high-refractive index particles trapped in dynamic arrays of counterpropagating optical tweezers Article

Appl. Opt., 3196-3202.

A. van der Horst, P.D.J. van Oostrum, A. Moroz, A. van Blaaderen and A.M. Dogterom (Marileen)

January 2008
Bidirectional membrane tube dynamics driven by nonprocessive motors Article

PNAS, 7993-7997.

P.M. Shaklee, T. Idema, G. Koster, C. Storm, T. Schmidt and A.M. Dogterom (Marileen)

January 2008
Optical cavity modes in gold shell colloids Article

J. Appl. Phys., 103(Article number: 123105), 1-7.

J.J. Penninkhof, L.A. Sweatlock, A. Moroz, H.A. Atwater (Harry), A. van Blaaderen and A. Polman (Albert)

January 2008
Short-time inertial response of viscoelastic fluids measured with Brownian motion and with active probes Article

Phys. Rev. E, 77(6, Article number: 61508), 1-13.

M. Atakhorrami, D. Mizuno, G.H. Koenderink (Gijsje), T.B. Liverpool, F.C. MacKintosh (Fred) and C.F. Schmidt

January 2008
Spatially resolved observation of dipole-dipole interaction between Rydberg atoms Article

Phys. Rev. Lett., 100(Article number: 243201), 1-4.

C.S.E. van Ditzhuijzen, A.F. Koenderink (Femius), J.V. Hernández, F. Robicheaux, L.D. Noordam and H.B. van Linden van den Heuvell

January 2008
Femtosecond spectroscopic study of the solvation of amphiphilic molecules by water Article

Chem. Phys., 350(1-3), 87-93.

Y.L.A. Rezus (Yves) and H.J. Bakker (Huib)

January 2008
Ultrafast vibrational dynamics of interfacial water Article

Chem. Phys., 350(1-3), 23-30.

A. Ghosh, M. Smits, M. Sovago, J. Bredenbeck, M. Müller (Michiel) and M. Bonn (Mischa)

January 2008
Crystallization under shear in isotactic polypropylene containing nucleators Article

Polymer, 3076-3083.

D. Byelov (Dimitry), P. Panine, K. Remerie, E. Biemond, G.C. Alfonso and W.H. de Jeu

January 2008
Spatial distribution and near-field coupling of surface plasmon polariton Bloch modes Article

Phys. Rev. B, 77(Article number: 235439), 1-7.

M. Sandtke and L.K. Kuipers (Kobus)

January 2008
Force-generation and dynamic instability of microtubule bundles Article

PNAS, 8920-8925.

L. Laan (Liedewij), J. Husson, E.L. Munteanu, J.W.J. Kerssemakers and A.M. Dogterom (Marileen)

January 2008
Mid-IR transmission of a large-area 2D silicon photonic crystal slab Article

J. Phys. D: Appl. Phys., 41(Article number: 135105), 1-6.

L. Prodan, R. Hagen, P. Gross, R. Arts, R. Beigang, C. Fallnich, A. Schirmacher, L.K. Kuipers (Kobus) and K-J Boller

January 2008
Fractional decay of quantum dots in real photonic crystals Article

Opt. Lett., 1557-1559.

P. Kristensen, A.F. Koenderink (Femius), P. Lodahl, B. Tromborg and J. Mørk

January 2008
Above threshold ionization in a strong dc electric field Article

Phys. Rev. A, 78(Article number: 13413), 1-7.

Y.F. Ni (Yongfeng), S. Zamith, F. Lépine, Tatiana Marchenko, M.F. Kling, O. Ghafur, H.G. Muller, G. Berden, F. Robicheaux and M.J.J. Vrakking

January 2008
Liquid-vapor transition driven by bond disorder Article

Phys. Rev. Lett., 101(4, Article number: 45701), 1-4.

B. Bozorgui and D. Frenkel

January 2008
Dynamical heterogeneity in a glass-forming ideal gas Article

Phys. Rev. B, 78(Article number: 11505), 1-11.

P. Charbonneau, C. Das and D. Frenkel

January 2008
Cellulose microfibril deposition: coordinated activity at the plant plasma membrane Article

J. Microsc., 192-200.

J.J. Lindeboom (Jelmer), B.M. Mulder (Bela), J.W. Vos (Jan), T. Ketelaar (Tijs) and A.M.C. Emons (Anne Mie)

January 2008
Sphere size distributions from finite thickness sections: a forward approach employing a genetic algorithm Article

J. Microsc., 257-264.

S. de Nooijer, T. Ketelaar (Tijs) and B.M. Mulder (Bela)

January 2008
Rates of exocytosis and endocytosis in Arabidopsis root hairs and pollen tubes Article

J. Microsc., 265-273.

T. Ketelaar (Tijs), M.E. Galway, B.M. Mulder (Bela) and A.M.C. Emons (Anne Mie)

January 2008
Moleculaire houdgreep ontrafeld Article

NTvN, 268-270.

R.G.H. van Leeuwen and S.J. Tans (Sander)

January 2008
Reaction Brownian dynamics and the effect of spatial fluctuations on the gain of a push-pull network Article

J. Chem. Phys., 129(Article number: 54112), 1-11.

M.J. Morelli and P.R. ten Wolde (Pieter Rein)

January 2008
Quantitative label-free imaging of lipid composition and packing of individual cellular lipid droplets using multiplex CARS microscopy Article

Biophys. J., 4908-4914.

H.A. Rinia, K.N.J. Burger, M. Bonn (Mischa) and M. Müller (Michiel)

January 2008
Quasibinary amorphous phase in a three-dimensional system of particles with repulsive-shoulder interactions Article

J. Chem. Phys., 129(Article number: 64512), 1-6.

Y.D. Fomin, N.V. Gribova, V.N. Ryzhov, S.M. Stishov and D. Frenkel

January 2008
State-of-the-art models for the phase diagram of carbon and diamond nucleation Article

Mol. Phys., 2011-2038.

L.M. Ghiringhelli, C. Valeriani, J.H. Los, E.J. Meijer, A. Fasolino and D. Frenkel

January 2008
On the mechanism of charge transport in pentacene Article

J. Chem. Phys., 129(Article number: 44704), 1-5.

H.A. van Laarhoven, C.F.J. Flipse, M. Koeberg, M. Bonn (Mischa), E. Hendry, G. Orlandi, O.D. Jurchescu, T.T.M. Palstra and A. Toisi

January 2008
Dispersion of charged tracers in charged porous media Article

Chem. Phys. Lett., 83(Article number: 34004), 1-6.

B. Rotenberg, I. Pagonabarraga and D. Frenkel

January 2008
Regulatory control and the costs and benefits of biochemical noise Article

PLoS Comput. Biol., 4(Article number: 1000125), 1-13.

S. Tanase-Nicola and P.R. ten Wolde (Pieter Rein)

January 2008
A THz spectrometer based on a CsI prism Article

J. Opt. A, 10(Article number: 95303), 1-7.

A.S. Meijer, J.J.H. Pijpers, H.-K. Nienhuys, M. Bonn (Mischa) and W.J. van der Zande

January 2008

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